Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Gm43183-201ENSMUST00000200632 547 ntBASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cpsf4Q8BQZ5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4Q8BQZ5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cpsf4Q8BQZ5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cpsf4Q8BQZ5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cpsf4Q8BQZ5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Mir1199-201ENSMUST00000117015 119 ntBASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Gm37292-201ENSMUST00000192062 758 ntBASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Gm29791-202ENSMUST00000207888 369 ntBASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4Q8BQZ5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Mir6349-201ENSMUST00000184059 97 ntBASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4Q8BQZ5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms