Protein–RNA interactions for Protein: Q8BMN3

Chrnb3, Neuronal acetylcholine receptor subunit beta-3, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb3Q8BMN3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.77■□□□□ 0.28
Chrnb3Q8BMN3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrnb3Q8BMN3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrnb3Q8BMN3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Chrnb3Q8BMN3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrnb3Q8BMN3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chrnb3Q8BMN3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Chrnb3Q8BMN3 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.77■□□□□ 0.28
Chrnb3Q8BMN3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrnb3Q8BMN3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chrnb3Q8BMN3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chrnb3Q8BMN3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chrnb3Q8BMN3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrnb3Q8BMN3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Gm10013-201ENSMUST00000106074 672 ntBASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrnb3Q8BMN3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrnb3Q8BMN3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrnb3Q8BMN3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrnb3Q8BMN3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Chrnb3Q8BMN3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.74■□□□□ 0.27
Chrnb3Q8BMN3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrnb3Q8BMN3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrnb3Q8BMN3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrnb3Q8BMN3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrnb3Q8BMN3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Chrnb3Q8BMN3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Gm18101-201ENSMUST00000215769 548 ntBASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Gm18032-201ENSMUST00000222541 538 ntBASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrnb3Q8BMN3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrnb3Q8BMN3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrnb3Q8BMN3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.72■□□□□ 0.27
Chrnb3Q8BMN3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrnb3Q8BMN3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrnb3Q8BMN3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrnb3Q8BMN3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrnb3Q8BMN3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrnb3Q8BMN3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.72■□□□□ 0.27
Chrnb3Q8BMN3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrnb3Q8BMN3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrnb3Q8BMN3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrnb3Q8BMN3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms