Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Gm5417-201ENSMUST00000079706 384 ntBASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Srrm4Q8BKA3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Gm12085-201ENSMUST00000119263 940 ntBASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Gm3375-201ENSMUST00000203929 796 ntBASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Srrm4Q8BKA3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Mir8112-201ENSMUST00000184382 131 ntBASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Gm8969-201ENSMUST00000199694 526 ntBASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Srrm4Q8BKA3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Srrm4Q8BKA3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Srrm4Q8BKA3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Srrm4Q8BKA3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Srrm4Q8BKA3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Srrm4Q8BKA3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Srrm4Q8BKA3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Srrm4Q8BKA3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Srrm4Q8BKA3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Srrm4Q8BKA3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms