Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh20Q8BIZ0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh20Q8BIZ0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.73■□□□□ 0.27
Pcdh20Q8BIZ0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Gm10698-201ENSMUST00000182663 604 ntBASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh20Q8BIZ0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Mtag2-201ENSMUST00000058665 714 ntBASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh20Q8BIZ0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
Pcdh20Q8BIZ0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdh20Q8BIZ0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdh20Q8BIZ0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh20Q8BIZ0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh20Q8BIZ0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh20Q8BIZ0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh20Q8BIZ0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh20Q8BIZ0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh20Q8BIZ0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh20Q8BIZ0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh20Q8BIZ0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdh20Q8BIZ0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdh20Q8BIZ0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms