Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ubp1Q811S7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ubp1Q811S7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Ubp1Q811S7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubp1Q811S7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.88■□□□□ 0.29
Ubp1Q811S7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ubp1Q811S7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Gm7638-201ENSMUST00000121348 967 ntBASIC16.87■□□□□ 0.29
Ubp1Q811S7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubp1Q811S7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Gm15565-201ENSMUST00000118890 427 ntBASIC16.86■□□□□ 0.29
Ubp1Q811S7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Gm30025-201ENSMUST00000218555 728 ntBASIC16.86■□□□□ 0.29
Ubp1Q811S7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.86■□□□□ 0.29
Ubp1Q811S7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.86■□□□□ 0.29
Ubp1Q811S7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ubp1Q811S7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms