Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.73■□□□□ 0.27
Trim50Q810I2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.73■□□□□ 0.27
Trim50Q810I2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.73■□□□□ 0.27
Trim50Q810I2 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.73■□□□□ 0.27
Trim50Q810I2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim50Q810I2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim50Q810I2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Trim50Q810I2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim50Q810I2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim50Q810I2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.73■□□□□ 0.27
Trim50Q810I2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim50Q810I2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.73■□□□□ 0.27
Trim50Q810I2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim50Q810I2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trim50Q810I2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trim50Q810I2 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.72■□□□□ 0.27
Trim50Q810I2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim50Q810I2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim50Q810I2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim50Q810I2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim50Q810I2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Trim50Q810I2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim50Q810I2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trim50Q810I2 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.71■□□□□ 0.27
Trim50Q810I2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim50Q810I2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim50Q810I2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim50Q810I2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim50Q810I2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trim50Q810I2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim50Q810I2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim50Q810I2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim50Q810I2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim50Q810I2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim50Q810I2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim50Q810I2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim50Q810I2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim50Q810I2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.7■□□□□ 0.26
Trim50Q810I2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Trim50Q810I2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim50Q810I2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim50Q810I2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim50Q810I2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim50Q810I2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim50Q810I2 Gm12085-201ENSMUST00000119263 940 ntBASIC16.69■□□□□ 0.26
Trim50Q810I2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trim50Q810I2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Trim50Q810I2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim50Q810I2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms