Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trnp1Q80ZI1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trnp1Q80ZI1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Mir5131-201ENSMUST00000175426 93 ntBASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trnp1Q80ZI1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Gm29707-201ENSMUST00000196325 491 ntBASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trnp1Q80ZI1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Trnp1Q80ZI1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Trnp1Q80ZI1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trnp1Q80ZI1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trnp1Q80ZI1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Trnp1Q80ZI1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.33■□□□□ 0.69
Trnp1Q80ZI1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trnp1Q80ZI1 Gm8000-201ENSMUST00000188378 592 ntBASIC19.33■□□□□ 0.68
Trnp1Q80ZI1 Gm44450-201ENSMUST00000199528 114 ntBASIC19.33■□□□□ 0.68
Trnp1Q80ZI1 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.33■□□□□ 0.68
Trnp1Q80ZI1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trnp1Q80ZI1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trnp1Q80ZI1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trnp1Q80ZI1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trnp1Q80ZI1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Trnp1Q80ZI1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trnp1Q80ZI1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trnp1Q80ZI1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trnp1Q80ZI1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trnp1Q80ZI1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trnp1Q80ZI1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trnp1Q80ZI1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trnp1Q80ZI1 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.31■□□□□ 0.68
Trnp1Q80ZI1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trnp1Q80ZI1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trnp1Q80ZI1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.31■□□□□ 0.68
Trnp1Q80ZI1 Gm44357-201ENSMUST00000195897 142 ntBASIC19.31■□□□□ 0.68
Trnp1Q80ZI1 Gm19658-201ENSMUST00000196231 138 ntBASIC19.31■□□□□ 0.68
Trnp1Q80ZI1 Gm44367-201ENSMUST00000196836 138 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms