Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Lrrtm4Q80XG9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrtm4Q80XG9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrtm4Q80XG9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lrrtm4Q80XG9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrtm4Q80XG9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lrrtm4Q80XG9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrtm4Q80XG9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lrrtm4Q80XG9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lrrtm4Q80XG9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Lrrtm4Q80XG9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.71■□□□□ 0.26
Lrrtm4Q80XG9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Lrrtm4Q80XG9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Lrrtm4Q80XG9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Gm18958-201ENSMUST00000174258 762 ntBASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrtm4Q80XG9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Gm7370-201ENSMUST00000219471 767 ntBASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.69■□□□□ 0.26
Lrrtm4Q80XG9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrtm4Q80XG9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Lrrtm4Q80XG9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms