Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Gm6443-201ENSMUST00000203599 874 ntBASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Prpf40bQ80W14 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf40bQ80W14 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Gm24589-201ENSMUST00000116692 94 ntBASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf40bQ80W14 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf40bQ80W14 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Prpf40bQ80W14 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf40bQ80W14 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf40bQ80W14 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.72■□□□□ 0.75
Prpf40bQ80W14 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Prpf40bQ80W14 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf40bQ80W14 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.72■□□□□ 0.75
Prpf40bQ80W14 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Prpf40bQ80W14 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf40bQ80W14 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf40bQ80W14 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf40bQ80W14 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf40bQ80W14 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Mir3081-201ENSMUST00000175305 84 ntBASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf40bQ80W14 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf40bQ80W14 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms