Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim62Q80V85 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim62Q80V85 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim62Q80V85 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim62Q80V85 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.77■□□□□ 0.44
Trim62Q80V85 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim62Q80V85 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim62Q80V85 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trim62Q80V85 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim62Q80V85 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Trim62Q80V85 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim62Q80V85 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim62Q80V85 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim62Q80V85 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim62Q80V85 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim62Q80V85 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim62Q80V85 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim62Q80V85 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim62Q80V85 Gm18958-201ENSMUST00000174258 762 ntBASIC17.76■□□□□ 0.43
Trim62Q80V85 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim62Q80V85 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim62Q80V85 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim62Q80V85 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Trim62Q80V85 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim62Q80V85 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim62Q80V85 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim62Q80V85 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim62Q80V85 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim62Q80V85 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim62Q80V85 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.75■□□□□ 0.43
Trim62Q80V85 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim62Q80V85 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim62Q80V85 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim62Q80V85 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim62Q80V85 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim62Q80V85 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.75■□□□□ 0.43
Trim62Q80V85 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.75■□□□□ 0.43
Trim62Q80V85 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim62Q80V85 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim62Q80V85 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim62Q80V85 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim62Q80V85 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim62Q80V85 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim62Q80V85 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim62Q80V85 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim62Q80V85 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim62Q80V85 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Trim62Q80V85 Gm7889-201ENSMUST00000185591 958 ntBASIC17.74■□□□□ 0.43
Trim62Q80V85 Gm18959-201ENSMUST00000208954 655 ntBASIC17.74■□□□□ 0.43
Trim62Q80V85 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim62Q80V85 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim62Q80V85 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim62Q80V85 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Trim62Q80V85 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim62Q80V85 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim62Q80V85 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Trim62Q80V85 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim62Q80V85 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.73■□□□□ 0.43
Trim62Q80V85 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim62Q80V85 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim62Q80V85 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim62Q80V85 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim62Q80V85 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim62Q80V85 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.73■□□□□ 0.43
Trim62Q80V85 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim62Q80V85 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.73■□□□□ 0.43
Trim62Q80V85 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim62Q80V85 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim62Q80V85 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trim62Q80V85 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim62Q80V85 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim62Q80V85 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim62Q80V85 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim62Q80V85 Mir7071-201ENSMUST00000184847 69 ntBASIC17.72■□□□□ 0.43
Trim62Q80V85 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim62Q80V85 Gm45058-201ENSMUST00000205810 766 ntBASIC17.72■□□□□ 0.43
Trim62Q80V85 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim62Q80V85 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trim62Q80V85 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim62Q80V85 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim62Q80V85 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms