Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Gm27000-201ENSMUST00000182943 842 ntBASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Gm27463-201ENSMUST00000183569 57 ntBASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Gm37055-201ENSMUST00000191866 133 ntBASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Gm5417-201ENSMUST00000079706 384 ntBASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp38Q80UU2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpp38Q80UU2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpp38Q80UU2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpp38Q80UU2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rpp38Q80UU2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpp38Q80UU2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms