Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctdp1Q7TSG2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Rab3c-203ENSMUST00000224180 967 ntBASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ctdp1Q7TSG2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ctdp1Q7TSG2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.71■□□□□ 0.59
Ctdp1Q7TSG2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ctdp1Q7TSG2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ctdp1Q7TSG2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Gm29791-202ENSMUST00000207888 369 ntBASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctdp1Q7TSG2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Mir8112-201ENSMUST00000184382 131 ntBASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdp1Q7TSG2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdp1Q7TSG2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.68■□□□□ 0.58
Ctdp1Q7TSG2 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.68■□□□□ 0.58
Ctdp1Q7TSG2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdp1Q7TSG2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Ctdp1Q7TSG2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdp1Q7TSG2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.68■□□□□ 0.58
Ctdp1Q7TSG2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdp1Q7TSG2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdp1Q7TSG2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms