Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Gm11539-201ENSMUST00000119837 557 ntBASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Gm13436-201ENSMUST00000120418 567 ntBASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.35■□□□□ 0.53
Rnf139Q7TMV1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf139Q7TMV1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf139Q7TMV1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Gm15565-201ENSMUST00000118890 427 ntBASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf139Q7TMV1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf139Q7TMV1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms