Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.78■□□□□ 0.92
Sned1Q70E20 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sned1Q70E20 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.78■□□□□ 0.92
Sned1Q70E20 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sned1Q70E20 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sned1Q70E20 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sned1Q70E20 Auts2-212ENSMUST00000178555 309 ntBASIC20.78■□□□□ 0.92
Sned1Q70E20 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sned1Q70E20 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sned1Q70E20 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sned1Q70E20 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sned1Q70E20 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sned1Q70E20 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Sned1Q70E20 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sned1Q70E20 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sned1Q70E20 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.77■□□□□ 0.92
Sned1Q70E20 Gm12260-201ENSMUST00000122447 411 ntBASIC20.77■□□□□ 0.91
Sned1Q70E20 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.77■□□□□ 0.91
Sned1Q70E20 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sned1Q70E20 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.77■□□□□ 0.91
Sned1Q70E20 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Sned1Q70E20 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sned1Q70E20 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sned1Q70E20 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.77■□□□□ 0.91
Sned1Q70E20 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sned1Q70E20 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Sned1Q70E20 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sned1Q70E20 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sned1Q70E20 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Sned1Q70E20 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Sned1Q70E20 Gm14822-201ENSMUST00000122247 291 ntBASIC20.76■□□□□ 0.91
Sned1Q70E20 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Sned1Q70E20 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.76■□□□□ 0.91
Sned1Q70E20 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Sned1Q70E20 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Sned1Q70E20 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sned1Q70E20 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sned1Q70E20 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sned1Q70E20 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sned1Q70E20 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sned1Q70E20 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sned1Q70E20 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sned1Q70E20 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sned1Q70E20 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Sned1Q70E20 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Sned1Q70E20 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sned1Q70E20 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Sned1Q70E20 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sned1Q70E20 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Sned1Q70E20 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Sned1Q70E20 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Sned1Q70E20 Gm24513-201ENSMUST00000174964 138 ntBASIC20.74■□□□□ 0.91
Sned1Q70E20 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.74■□□□□ 0.91
Sned1Q70E20 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sned1Q70E20 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sned1Q70E20 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.73■□□□□ 0.91
Sned1Q70E20 Gm13418-201ENSMUST00000119097 944 ntBASIC20.73■□□□□ 0.91
Sned1Q70E20 Gm14140-201ENSMUST00000119999 995 ntBASIC20.73■□□□□ 0.91
Sned1Q70E20 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sned1Q70E20 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.73■□□□□ 0.91
Sned1Q70E20 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.73■□□□□ 0.91
Sned1Q70E20 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sned1Q70E20 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sned1Q70E20 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sned1Q70E20 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.73■□□□□ 0.91
Sned1Q70E20 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sned1Q70E20 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sned1Q70E20 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.72■□□□□ 0.91
Sned1Q70E20 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sned1Q70E20 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sned1Q70E20 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sned1Q70E20 Gm10576-201ENSMUST00000191927 825 ntBASIC20.72■□□□□ 0.91
Sned1Q70E20 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sned1Q70E20 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sned1Q70E20 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sned1Q70E20 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sned1Q70E20 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sned1Q70E20 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sned1Q70E20 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sned1Q70E20 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sned1Q70E20 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sned1Q70E20 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.71■□□□□ 0.91
Sned1Q70E20 Gm27397-201ENSMUST00000184997 107 ntBASIC20.71■□□□□ 0.91
Sned1Q70E20 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.71■□□□□ 0.91
Sned1Q70E20 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sned1Q70E20 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sned1Q70E20 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sned1Q70E20 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms