Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm8Q6ZWM4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm8Q6ZWM4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm8Q6ZWM4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm8Q6ZWM4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Lsm8Q6ZWM4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Lsm8Q6ZWM4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Lsm8Q6ZWM4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Gm7791-201ENSMUST00000219066 539 ntBASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm8Q6ZWM4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm8Q6ZWM4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm8Q6ZWM4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm8Q6ZWM4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm8Q6ZWM4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Lsm8Q6ZWM4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm8Q6ZWM4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Lsm8Q6ZWM4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms