Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup188Q6ZQH8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup188Q6ZQH8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup188Q6ZQH8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.37■□□□□ 0.85
Nup188Q6ZQH8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup188Q6ZQH8 Gm11594-201ENSMUST00000122313 162 ntBASIC20.37■□□□□ 0.85
Nup188Q6ZQH8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Nup188Q6ZQH8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Nup188Q6ZQH8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
Nup188Q6ZQH8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup188Q6ZQH8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nup188Q6ZQH8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup188Q6ZQH8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup188Q6ZQH8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 Mir5126-201ENSMUST00000175513 77 ntBASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 Gm7063-201ENSMUST00000186840 981 ntBASIC20.36■□□□□ 0.85
Nup188Q6ZQH8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup188Q6ZQH8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup188Q6ZQH8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.35■□□□□ 0.85
Nup188Q6ZQH8 Gm29707-201ENSMUST00000196325 491 ntBASIC20.35■□□□□ 0.85
Nup188Q6ZQH8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup188Q6ZQH8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup188Q6ZQH8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Nup188Q6ZQH8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup188Q6ZQH8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup188Q6ZQH8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup188Q6ZQH8 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.34■□□□□ 0.85
Nup188Q6ZQH8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup188Q6ZQH8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup188Q6ZQH8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Nup188Q6ZQH8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup188Q6ZQH8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.34■□□□□ 0.85
Nup188Q6ZQH8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Nup188Q6ZQH8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup188Q6ZQH8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.34■□□□□ 0.85
Nup188Q6ZQH8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.34■□□□□ 0.85
Nup188Q6ZQH8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nup188Q6ZQH8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup188Q6ZQH8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup188Q6ZQH8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup188Q6ZQH8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup188Q6ZQH8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup188Q6ZQH8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup188Q6ZQH8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.33■□□□□ 0.84
Nup188Q6ZQH8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.33■□□□□ 0.84
Nup188Q6ZQH8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nup188Q6ZQH8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.33■□□□□ 0.84
Nup188Q6ZQH8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup188Q6ZQH8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup188Q6ZQH8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup188Q6ZQH8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup188Q6ZQH8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Gm27867-201ENSMUST00000184778 125 ntBASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Gm18195-201ENSMUST00000207604 706 ntBASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup188Q6ZQH8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms