Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc44a1Q6X893 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.9■□□□□ 0.78
Slc44a1Q6X893 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slc44a1Q6X893 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slc44a1Q6X893 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Slc44a1Q6X893 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Slc44a1Q6X893 Gm13474-201ENSMUST00000122466 815 ntBASIC19.89■□□□□ 0.77
Slc44a1Q6X893 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc44a1Q6X893 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Slc44a1Q6X893 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.89■□□□□ 0.77
Slc44a1Q6X893 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc44a1Q6X893 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Slc44a1Q6X893 Gm18959-201ENSMUST00000208954 655 ntBASIC19.89■□□□□ 0.77
Slc44a1Q6X893 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.89■□□□□ 0.77
Slc44a1Q6X893 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc44a1Q6X893 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Slc44a1Q6X893 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc44a1Q6X893 Gm9987-201ENSMUST00000069768 567 ntBASIC19.89■□□□□ 0.77
Slc44a1Q6X893 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc44a1Q6X893 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Slc44a1Q6X893 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc44a1Q6X893 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc44a1Q6X893 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Mir7071-201ENSMUST00000184847 69 ntBASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slc44a1Q6X893 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc44a1Q6X893 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc44a1Q6X893 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Slc44a1Q6X893 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc44a1Q6X893 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Slc44a1Q6X893 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc44a1Q6X893 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.86■□□□□ 0.77
Slc44a1Q6X893 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.86■□□□□ 0.77
Slc44a1Q6X893 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Slc44a1Q6X893 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Slc44a1Q6X893 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc44a1Q6X893 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc44a1Q6X893 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Slc44a1Q6X893 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Mir5130-201ENSMUST00000175160 84 ntBASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Slc44a1Q6X893 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Slc44a1Q6X893 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc44a1Q6X893 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc44a1Q6X893 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.84■□□□□ 0.77
Slc44a1Q6X893 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc44a1Q6X893 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc44a1Q6X893 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc44a1Q6X893 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc44a1Q6X893 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc44a1Q6X893 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms