Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npc1l1Q6T3U4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1l1Q6T3U4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.53■□□□□ 0.88
Npc1l1Q6T3U4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Npc1l1Q6T3U4 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.52■□□□□ 0.88
Npc1l1Q6T3U4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Npc1l1Q6T3U4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Npc1l1Q6T3U4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.52■□□□□ 0.88
Npc1l1Q6T3U4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.52■□□□□ 0.88
Npc1l1Q6T3U4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Npc1l1Q6T3U4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Npc1l1Q6T3U4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Npc1l1Q6T3U4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Npc1l1Q6T3U4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Npc1l1Q6T3U4 Gm27389-201ENSMUST00000183622 195 ntBASIC20.52■□□□□ 0.87
Npc1l1Q6T3U4 Gm27704-201ENSMUST00000185094 107 ntBASIC20.52■□□□□ 0.87
Npc1l1Q6T3U4 Gm5587-201ENSMUST00000206270 674 ntBASIC20.52■□□□□ 0.87
Npc1l1Q6T3U4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Npc1l1Q6T3U4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Npc1l1Q6T3U4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Npc1l1Q6T3U4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.51■□□□□ 0.87
Npc1l1Q6T3U4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Gm17971-201ENSMUST00000190239 806 ntBASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Gm7213-201ENSMUST00000215977 950 ntBASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1l1Q6T3U4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1l1Q6T3U4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1l1Q6T3U4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1l1Q6T3U4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.49■□□□□ 0.87
Npc1l1Q6T3U4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1l1Q6T3U4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Npc1l1Q6T3U4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1l1Q6T3U4 Gm29518-201ENSMUST00000190858 372 ntBASIC20.49■□□□□ 0.87
Npc1l1Q6T3U4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1l1Q6T3U4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npc1l1Q6T3U4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms