Protein–RNA interactions for Protein: Q6RHW0

Krt9, Keratin, type I cytoskeletal 9, mousemouse

Predictions only

Length 743 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt9Q6RHW0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt9Q6RHW0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Krt9Q6RHW0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Gm17661-201ENSMUST00000170317 270 ntBASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Mir5130-201ENSMUST00000175160 84 ntBASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Gm45058-201ENSMUST00000205810 766 ntBASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Il3ra-202ENSMUST00000223589 738 ntBASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Krt9Q6RHW0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Krt9Q6RHW0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt9Q6RHW0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt9Q6RHW0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt9Q6RHW0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Krt9Q6RHW0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt9Q6RHW0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt9Q6RHW0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt9Q6RHW0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.16■□□□□ 0.66
Krt9Q6RHW0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt9Q6RHW0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Krt9Q6RHW0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Krt9Q6RHW0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Krt9Q6RHW0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.16■□□□□ 0.66
Krt9Q6RHW0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt9Q6RHW0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms