Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx58Q6Q899 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx58Q6Q899 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx58Q6Q899 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ddx58Q6Q899 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx58Q6Q899 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx58Q6Q899 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx58Q6Q899 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ddx58Q6Q899 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx58Q6Q899 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx58Q6Q899 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx58Q6Q899 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx58Q6Q899 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx58Q6Q899 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ddx58Q6Q899 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Ddx58Q6Q899 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx58Q6Q899 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.22■□□□□ 0.99
Ddx58Q6Q899 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx58Q6Q899 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx58Q6Q899 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.22■□□□□ 0.99
Ddx58Q6Q899 Gm14859-201ENSMUST00000117752 357 ntBASIC21.21■□□□□ 0.99
Ddx58Q6Q899 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.21■□□□□ 0.99
Ddx58Q6Q899 Gm37722-201ENSMUST00000193757 208 ntBASIC21.21■□□□□ 0.99
Ddx58Q6Q899 Gm17808-201ENSMUST00000200859 894 ntBASIC21.21■□□□□ 0.99
Ddx58Q6Q899 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx58Q6Q899 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx58Q6Q899 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx58Q6Q899 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx58Q6Q899 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Ddx58Q6Q899 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Gm7284-201ENSMUST00000131667 944 ntBASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx58Q6Q899 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ddx58Q6Q899 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.18■□□□□ 0.98
Ddx58Q6Q899 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx58Q6Q899 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ddx58Q6Q899 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ddx58Q6Q899 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.17■□□□□ 0.98
Ddx58Q6Q899 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx58Q6Q899 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx58Q6Q899 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx58Q6Q899 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx58Q6Q899 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Ddx58Q6Q899 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx58Q6Q899 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx58Q6Q899 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx58Q6Q899 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms