Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CtifQ6PEE2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CtifQ6PEE2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CtifQ6PEE2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CtifQ6PEE2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CtifQ6PEE2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CtifQ6PEE2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.33■□□□□ 0.53
CtifQ6PEE2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CtifQ6PEE2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CtifQ6PEE2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Gm45417-201ENSMUST00000209533 758 ntBASIC18.33■□□□□ 0.52
CtifQ6PEE2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CtifQ6PEE2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Gm12251-201ENSMUST00000117893 792 ntBASIC18.32■□□□□ 0.52
CtifQ6PEE2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CtifQ6PEE2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.31■□□□□ 0.52
CtifQ6PEE2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Smad6-203ENSMUST00000179458 273 ntBASIC18.31■□□□□ 0.52
CtifQ6PEE2 Gm29791-202ENSMUST00000207888 369 ntBASIC18.31■□□□□ 0.52
CtifQ6PEE2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CtifQ6PEE2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CtifQ6PEE2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CtifQ6PEE2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CtifQ6PEE2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Golgb1-201ENSMUST00000023534 498 ntBASIC18.29■□□□□ 0.52
CtifQ6PEE2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CtifQ6PEE2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms