Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dhx40Q6PE54 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dhx40Q6PE54 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Gm6576-201ENSMUST00000169678 883 ntBASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dhx40Q6PE54 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.04■□□□□ 0.64
Dhx40Q6PE54 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dhx40Q6PE54 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Gm10138-203ENSMUST00000206952 366 ntBASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.03■□□□□ 0.64
Dhx40Q6PE54 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Dhx40Q6PE54 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Dhx40Q6PE54 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Dhx40Q6PE54 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Dhx40Q6PE54 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms