Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Timm23-208ENSMUST00000226683 750 ntBASIC20.02■□□□□ 0.8
Smarcc2Q6PDG5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smarcc2Q6PDG5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc2Q6PDG5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc2Q6PDG5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Smarcc2Q6PDG5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smarcc2Q6PDG5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarcc2Q6PDG5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Smarcc2Q6PDG5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarcc2Q6PDG5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarcc2Q6PDG5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcc2Q6PDG5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Gm20472-201ENSMUST00000174403 1240 ntBASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcc2Q6PDG5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Gm24841-201ENSMUST00000158676 357 ntBASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcc2Q6PDG5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Gm15565-201ENSMUST00000118890 427 ntBASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Gm21814-202ENSMUST00000203277 873 ntBASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcc2Q6PDG5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Odf3b-204ENSMUST00000227834 930 ntBASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc2Q6PDG5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms