Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShbQ6PD21 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShbQ6PD21 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.58■□□□□ 0.56
ShbQ6PD21 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.58■□□□□ 0.56
ShbQ6PD21 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.58■□□□□ 0.56
ShbQ6PD21 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShbQ6PD21 Gm24513-201ENSMUST00000174964 138 ntBASIC18.58■□□□□ 0.56
ShbQ6PD21 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.58■□□□□ 0.56
ShbQ6PD21 Gm18421-201ENSMUST00000204122 625 ntBASIC18.58■□□□□ 0.56
ShbQ6PD21 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.58■□□□□ 0.56
ShbQ6PD21 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.58■□□□□ 0.56
ShbQ6PD21 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShbQ6PD21 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ShbQ6PD21 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ShbQ6PD21 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShbQ6PD21 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ShbQ6PD21 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShbQ6PD21 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.58■□□□□ 0.56
ShbQ6PD21 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShbQ6PD21 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShbQ6PD21 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShbQ6PD21 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShbQ6PD21 Gm12260-201ENSMUST00000122447 411 ntBASIC18.57■□□□□ 0.56
ShbQ6PD21 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.57■□□□□ 0.56
ShbQ6PD21 Auts2-212ENSMUST00000178555 309 ntBASIC18.57■□□□□ 0.56
ShbQ6PD21 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShbQ6PD21 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShbQ6PD21 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.57■□□□□ 0.56
ShbQ6PD21 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShbQ6PD21 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShbQ6PD21 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShbQ6PD21 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ShbQ6PD21 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ShbQ6PD21 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShbQ6PD21 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShbQ6PD21 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
ShbQ6PD21 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShbQ6PD21 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
ShbQ6PD21 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShbQ6PD21 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShbQ6PD21 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShbQ6PD21 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ShbQ6PD21 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShbQ6PD21 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.56■□□□□ 0.56
ShbQ6PD21 Gm27397-201ENSMUST00000184997 107 ntBASIC18.56■□□□□ 0.56
ShbQ6PD21 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.56■□□□□ 0.56
ShbQ6PD21 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.56■□□□□ 0.56
ShbQ6PD21 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShbQ6PD21 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShbQ6PD21 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.56■□□□□ 0.56
ShbQ6PD21 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ShbQ6PD21 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ShbQ6PD21 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ShbQ6PD21 Gm25990-201ENSMUST00000102440 86 ntBASIC18.55■□□□□ 0.56
ShbQ6PD21 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.55■□□□□ 0.56
ShbQ6PD21 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.55■□□□□ 0.56
ShbQ6PD21 Gm10576-201ENSMUST00000191927 825 ntBASIC18.55■□□□□ 0.56
ShbQ6PD21 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ShbQ6PD21 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ShbQ6PD21 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShbQ6PD21 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShbQ6PD21 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShbQ6PD21 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShbQ6PD21 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShbQ6PD21 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.54■□□□□ 0.56
ShbQ6PD21 Gm7230-201ENSMUST00000173026 815 ntBASIC18.54■□□□□ 0.56
ShbQ6PD21 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
ShbQ6PD21 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.54■□□□□ 0.56
ShbQ6PD21 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.54■□□□□ 0.56
ShbQ6PD21 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.54■□□□□ 0.56
ShbQ6PD21 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.54■□□□□ 0.56
ShbQ6PD21 Gm15590-201ENSMUST00000078419 552 ntBASIC18.54■□□□□ 0.56
ShbQ6PD21 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ShbQ6PD21 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShbQ6PD21 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.54■□□□□ 0.56
ShbQ6PD21 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShbQ6PD21 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShbQ6PD21 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShbQ6PD21 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ShbQ6PD21 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ShbQ6PD21 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ShbQ6PD21 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ShbQ6PD21 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.53■□□□□ 0.56
ShbQ6PD21 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ShbQ6PD21 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShbQ6PD21 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShbQ6PD21 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms