Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb4Q6P8W9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb4Q6P8W9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hmgb4Q6P8W9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb4Q6P8W9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb4Q6P8W9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.96■□□□□ 0.47
Hmgb4Q6P8W9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgb4Q6P8W9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgb4Q6P8W9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.96■□□□□ 0.46
Hmgb4Q6P8W9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgb4Q6P8W9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgb4Q6P8W9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Gm7638-201ENSMUST00000121348 967 ntBASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 AA414768-201ENSMUST00000121924 1257 ntBASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Gm22697-201ENSMUST00000175194 63 ntBASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.95■□□□□ 0.46
Hmgb4Q6P8W9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Gm18101-201ENSMUST00000215769 548 ntBASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgb4Q6P8W9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Gm6345-202ENSMUST00000180900 204 ntBASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Gm29791-202ENSMUST00000207888 369 ntBASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.93■□□□□ 0.46
Hmgb4Q6P8W9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgb4Q6P8W9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms