Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Mir6982-201ENSMUST00000184354 68 ntBASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Gm37055-201ENSMUST00000191866 133 ntBASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.37■□□□□ 0.37
Casc4Q6P2L7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Gm5417-201ENSMUST00000079706 384 ntBASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Casc4Q6P2L7 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.36■□□□□ 0.37
Casc4Q6P2L7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casc4Q6P2L7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casc4Q6P2L7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Gm21814-202ENSMUST00000203277 873 ntBASIC17.34■□□□□ 0.37
Casc4Q6P2L7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.34■□□□□ 0.37
Casc4Q6P2L7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Casc4Q6P2L7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Casc4Q6P2L7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Casc4Q6P2L7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.33■□□□□ 0.37
Casc4Q6P2L7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Casc4Q6P2L7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Casc4Q6P2L7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.33■□□□□ 0.37
Casc4Q6P2L7 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.33■□□□□ 0.37
Casc4Q6P2L7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Casc4Q6P2L7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Gm24841-201ENSMUST00000158676 357 ntBASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms