Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Gm10812-201ENSMUST00000099864 546 ntBASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hdac4Q6NZM9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac4Q6NZM9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac4Q6NZM9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac4Q6NZM9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac4Q6NZM9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac4Q6NZM9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac4Q6NZM9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.16■□□□□ 0.66
Hdac4Q6NZM9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.16■□□□□ 0.66
Hdac4Q6NZM9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac4Q6NZM9 Il3ra-202ENSMUST00000223589 738 ntBASIC19.16■□□□□ 0.66
Hdac4Q6NZM9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.16■□□□□ 0.66
Hdac4Q6NZM9 Odf3b-204ENSMUST00000227834 930 ntBASIC19.16■□□□□ 0.66
Hdac4Q6NZM9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac4Q6NZM9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Gm3375-201ENSMUST00000203929 796 ntBASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac4Q6NZM9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hdac4Q6NZM9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Hdac4Q6NZM9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Hdac4Q6NZM9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Hdac4Q6NZM9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac4Q6NZM9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Mir5122-201ENSMUST00000175004 89 ntBASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Gm21814-202ENSMUST00000203277 873 ntBASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hdac4Q6NZM9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms