Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Gm43183-201ENSMUST00000200632 547 ntBASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf6Q6NVF9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cpsf6Q6NVF9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Gm5643-201ENSMUST00000117081 966 ntBASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Cpsf6Q6NVF9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Gm10517-202ENSMUST00000192970 758 ntBASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Gm4974-201ENSMUST00000209974 875 ntBASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf6Q6NVF9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.62■□□□□ 0.25
Cpsf6Q6NVF9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Gm10653-202ENSMUST00000139570 835 ntBASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.61■□□□□ 0.25
Cpsf6Q6NVF9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Cpsf6Q6NVF9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf6Q6NVF9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf6Q6NVF9 Gm15378-201ENSMUST00000121894 207 ntBASIC16.6■□□□□ 0.25
Cpsf6Q6NVF9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf6Q6NVF9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cpsf6Q6NVF9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.6■□□□□ 0.25
Cpsf6Q6NVF9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms