Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19■□□□□ 0.63
Krt39Q6IFX4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19■□□□□ 0.63
Krt39Q6IFX4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Gm6576-201ENSMUST00000169678 883 ntBASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt39Q6IFX4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Gm15375-201ENSMUST00000119510 849 ntBASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Gm2559-201ENSMUST00000201323 363 ntBASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Krt39Q6IFX4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Dio3-201ENSMUST00000097228 1449 ntBASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt39Q6IFX4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt39Q6IFX4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.95■□□□□ 0.62
Krt39Q6IFX4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt39Q6IFX4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt39Q6IFX4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt39Q6IFX4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Krt39Q6IFX4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.95■□□□□ 0.62
Krt39Q6IFX4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt39Q6IFX4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt39Q6IFX4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Krt39Q6IFX4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt39Q6IFX4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt39Q6IFX4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Krt39Q6IFX4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt39Q6IFX4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms