Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt42Q6IFX2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Gm13401-201ENSMUST00000117074 291 ntBASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Gm12821-201ENSMUST00000120022 600 ntBASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt42Q6IFX2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Krt42Q6IFX2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Krt42Q6IFX2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Krt42Q6IFX2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Krt42Q6IFX2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Krt42Q6IFX2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt42Q6IFX2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms