Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Cep290Q6A078 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cep290Q6A078 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cep290Q6A078 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cep290Q6A078 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cep290Q6A078 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.53■□□□□ 0.4
Cep290Q6A078 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cep290Q6A078 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.53■□□□□ 0.4
Cep290Q6A078 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.53■□□□□ 0.4
Cep290Q6A078 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cep290Q6A078 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cep290Q6A078 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cep290Q6A078 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cep290Q6A078 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cep290Q6A078 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cep290Q6A078 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cep290Q6A078 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cep290Q6A078 Gm27397-201ENSMUST00000184997 107 ntBASIC17.52■□□□□ 0.4
Cep290Q6A078 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cep290Q6A078 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cep290Q6A078 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cep290Q6A078 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cep290Q6A078 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cep290Q6A078 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.52■□□□□ 0.39
Cep290Q6A078 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cep290Q6A078 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cep290Q6A078 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cep290Q6A078 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cep290Q6A078 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cep290Q6A078 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cep290Q6A078 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cep290Q6A078 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cep290Q6A078 Tgds-204ENSMUST00000228543 1594 ntBASIC17.51■□□□□ 0.39
Cep290Q6A078 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cep290Q6A078 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cep290Q6A078 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.51■□□□□ 0.39
Cep290Q6A078 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.51■□□□□ 0.39
Cep290Q6A078 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cep290Q6A078 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cep290Q6A078 Gm11025-201ENSMUST00000140773 466 ntBASIC17.5■□□□□ 0.39
Cep290Q6A078 Gm25911-201ENSMUST00000157621 56 ntBASIC17.5■□□□□ 0.39
Cep290Q6A078 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Cep290Q6A078 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cep290Q6A078 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.5■□□□□ 0.39
Cep290Q6A078 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cep290Q6A078 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cep290Q6A078 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cep290Q6A078 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.5■□□□□ 0.39
Cep290Q6A078 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cep290Q6A078 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cep290Q6A078 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.5■□□□□ 0.39
Cep290Q6A078 Gm13312-201ENSMUST00000119631 718 ntBASIC17.5■□□□□ 0.39
Cep290Q6A078 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cep290Q6A078 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.5■□□□□ 0.39
Cep290Q6A078 Gm29791-202ENSMUST00000207888 369 ntBASIC17.5■□□□□ 0.39
Cep290Q6A078 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cep290Q6A078 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cep290Q6A078 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cep290Q6A078 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cep290Q6A078 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cep290Q6A078 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Cep290Q6A078 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cep290Q6A078 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Cep290Q6A078 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.49■□□□□ 0.39
Cep290Q6A078 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.49■□□□□ 0.39
Cep290Q6A078 Gm7230-201ENSMUST00000173026 815 ntBASIC17.49■□□□□ 0.39
Cep290Q6A078 Chchd1-203ENSMUST00000224633 557 ntBASIC17.49■□□□□ 0.39
Cep290Q6A078 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cep290Q6A078 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cep290Q6A078 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cep290Q6A078 Gm15165-201ENSMUST00000118140 502 ntBASIC17.48■□□□□ 0.39
Cep290Q6A078 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.48■□□□□ 0.39
Cep290Q6A078 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cep290Q6A078 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.48■□□□□ 0.39
Cep290Q6A078 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.48■□□□□ 0.39
Cep290Q6A078 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cep290Q6A078 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cep290Q6A078 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Cep290Q6A078 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Cep290Q6A078 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.48■□□□□ 0.39
Cep290Q6A078 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cep290Q6A078 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.48■□□□□ 0.39
Cep290Q6A078 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cep290Q6A078 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cep290Q6A078 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms