Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Clcn1Q64347 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn1Q64347 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn1Q64347 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn1Q64347 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn1Q64347 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn1Q64347 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.69■■□□□ 1.06
Clcn1Q64347 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.69■■□□□ 1.06
Clcn1Q64347 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Clcn1Q64347 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn1Q64347 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn1Q64347 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn1Q64347 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn1Q64347 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn1Q64347 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn1Q64347 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Clcn1Q64347 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn1Q64347 Gm24589-201ENSMUST00000116692 94 ntBASIC21.68■■□□□ 1.06
Clcn1Q64347 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn1Q64347 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn1Q64347 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.68■■□□□ 1.06
Clcn1Q64347 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn1Q64347 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.68■■□□□ 1.06
Clcn1Q64347 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn1Q64347 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn1Q64347 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn1Q64347 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn1Q64347 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn1Q64347 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn1Q64347 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn1Q64347 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn1Q64347 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Clcn1Q64347 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.67■■□□□ 1.06
Clcn1Q64347 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn1Q64347 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn1Q64347 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn1Q64347 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn1Q64347 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Clcn1Q64347 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn1Q64347 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn1Q64347 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn1Q64347 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn1Q64347 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.66■■□□□ 1.06
Clcn1Q64347 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn1Q64347 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn1Q64347 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.66■■□□□ 1.06
Clcn1Q64347 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.66■■□□□ 1.06
Clcn1Q64347 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn1Q64347 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn1Q64347 Gm27357-201ENSMUST00000183754 135 ntBASIC21.66■■□□□ 1.06
Clcn1Q64347 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn1Q64347 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Clcn1Q64347 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn1Q64347 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn1Q64347 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn1Q64347 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn1Q64347 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn1Q64347 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn1Q64347 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn1Q64347 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn1Q64347 Gm18115-201ENSMUST00000221209 621 ntBASIC21.65■■□□□ 1.06
Clcn1Q64347 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Clcn1Q64347 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn1Q64347 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.65■■□□□ 1.06
Clcn1Q64347 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn1Q64347 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Clcn1Q64347 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Clcn1Q64347 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Clcn1Q64347 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Clcn1Q64347 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Clcn1Q64347 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Clcn1Q64347 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Clcn1Q64347 Gm34391-201ENSMUST00000203706 907 ntBASIC21.64■■□□□ 1.05
Clcn1Q64347 Gm44771-201ENSMUST00000206975 626 ntBASIC21.64■■□□□ 1.05
Clcn1Q64347 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn1Q64347 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn1Q64347 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn1Q64347 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Clcn1Q64347 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn1Q64347 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Clcn1Q64347 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Clcn1Q64347 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn1Q64347 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.63■■□□□ 1.05
Clcn1Q64347 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Clcn1Q64347 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn1Q64347 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn1Q64347 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn1Q64347 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms