Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col7a1Q63870 Tgds-204ENSMUST00000228543 1594 ntBASIC14.26□□□□□ -0.13
Col7a1Q63870 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.26□□□□□ -0.13
Col7a1Q63870 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.26□□□□□ -0.13
Col7a1Q63870 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.26□□□□□ -0.13
Col7a1Q63870 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.26□□□□□ -0.13
Col7a1Q63870 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.26□□□□□ -0.13
Col7a1Q63870 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col7a1Q63870 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col7a1Q63870 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col7a1Q63870 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col7a1Q63870 Mir6977-201ENSMUST00000184960 64 ntBASIC14.26□□□□□ -0.13
Col7a1Q63870 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col7a1Q63870 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col7a1Q63870 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col7a1Q63870 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.25□□□□□ -0.13
Col7a1Q63870 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.25□□□□□ -0.13
Col7a1Q63870 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col7a1Q63870 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Col7a1Q63870 Gm13312-201ENSMUST00000119631 718 ntBASIC14.25□□□□□ -0.13
Col7a1Q63870 Gm11764-201ENSMUST00000120221 623 ntBASIC14.25□□□□□ -0.13
Col7a1Q63870 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.25□□□□□ -0.13
Col7a1Q63870 Gm4535-201ENSMUST00000182274 558 ntBASIC14.25□□□□□ -0.13
Col7a1Q63870 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.25□□□□□ -0.13
Col7a1Q63870 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 Gm10355-201ENSMUST00000097146 517 ntBASIC14.25□□□□□ -0.13
Col7a1Q63870 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.25□□□□□ -0.13
Col7a1Q63870 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.25□□□□□ -0.13
Col7a1Q63870 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col7a1Q63870 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col7a1Q63870 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col7a1Q63870 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col7a1Q63870 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col7a1Q63870 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col7a1Q63870 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col7a1Q63870 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col7a1Q63870 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col7a1Q63870 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col7a1Q63870 Gm14127-201ENSMUST00000117906 678 ntBASIC14.24□□□□□ -0.13
Col7a1Q63870 Gm12428-201ENSMUST00000119844 727 ntBASIC14.24□□□□□ -0.13
Col7a1Q63870 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col7a1Q63870 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col7a1Q63870 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col7a1Q63870 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col7a1Q63870 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col7a1Q63870 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col7a1Q63870 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.23□□□□□ -0.13
Col7a1Q63870 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Col7a1Q63870 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.23□□□□□ -0.13
Col7a1Q63870 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.23□□□□□ -0.13
Col7a1Q63870 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 Mir7023-201ENSMUST00000185093 64 ntBASIC14.23□□□□□ -0.13
Col7a1Q63870 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col7a1Q63870 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.22□□□□□ -0.13
Col7a1Q63870 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Col7a1Q63870 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.22□□□□□ -0.13
Col7a1Q63870 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col7a1Q63870 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col7a1Q63870 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col7a1Q63870 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col7a1Q63870 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col7a1Q63870 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col7a1Q63870 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col7a1Q63870 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.22□□□□□ -0.13
Col7a1Q63870 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col7a1Q63870 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col7a1Q63870 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Col7a1Q63870 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col7a1Q63870 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col7a1Q63870 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.22□□□□□ -0.13
Col7a1Q63870 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col7a1Q63870 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col7a1Q63870 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.21□□□□□ -0.13
Col7a1Q63870 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.21□□□□□ -0.13
Col7a1Q63870 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.21□□□□□ -0.13
Col7a1Q63870 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms