Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six1Q62231 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six1Q62231 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Six1Q62231 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six1Q62231 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Six1Q62231 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six1Q62231 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Six1Q62231 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.61■□□□□ 0.41
Six1Q62231 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.61■□□□□ 0.41
Six1Q62231 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Six1Q62231 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Six1Q62231 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six1Q62231 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six1Q62231 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six1Q62231 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six1Q62231 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six1Q62231 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six1Q62231 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Six1Q62231 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Six1Q62231 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.6■□□□□ 0.41
Six1Q62231 Gm12382-201ENSMUST00000122005 922 ntBASIC17.6■□□□□ 0.41
Six1Q62231 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.6■□□□□ 0.41
Six1Q62231 Gm43183-201ENSMUST00000200632 547 ntBASIC17.6■□□□□ 0.41
Six1Q62231 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Six1Q62231 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Six1Q62231 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Six1Q62231 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Six1Q62231 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six1Q62231 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Six1Q62231 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six1Q62231 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.59■□□□□ 0.41
Six1Q62231 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Six1Q62231 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Six1Q62231 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six1Q62231 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six1Q62231 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Six1Q62231 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six1Q62231 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Six1Q62231 Gm12527-201ENSMUST00000117967 564 ntBASIC17.59■□□□□ 0.41
Six1Q62231 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Six1Q62231 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.59■□□□□ 0.41
Six1Q62231 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six1Q62231 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Six1Q62231 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.59■□□□□ 0.41
Six1Q62231 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six1Q62231 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six1Q62231 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six1Q62231 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six1Q62231 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Six1Q62231 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Six1Q62231 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six1Q62231 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Six1Q62231 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.58■□□□□ 0.4
Six1Q62231 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six1Q62231 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six1Q62231 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six1Q62231 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six1Q62231 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six1Q62231 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six1Q62231 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six1Q62231 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.57■□□□□ 0.4
Six1Q62231 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Six1Q62231 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six1Q62231 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six1Q62231 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Six1Q62231 Gm12441-201ENSMUST00000121806 588 ntBASIC17.57■□□□□ 0.4
Six1Q62231 Gm37856-201ENSMUST00000191634 999 ntBASIC17.57■□□□□ 0.4
Six1Q62231 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Six1Q62231 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six1Q62231 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.57■□□□□ 0.4
Six1Q62231 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six1Q62231 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Six1Q62231 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.57■□□□□ 0.4
Six1Q62231 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six1Q62231 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.57■□□□□ 0.4
Six1Q62231 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Six1Q62231 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.56■□□□□ 0.4
Six1Q62231 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Six1Q62231 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six1Q62231 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms