Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trim27Q62158 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim27Q62158 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim27Q62158 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Trim27Q62158 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim27Q62158 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.05■□□□□ 0.96
Trim27Q62158 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.05■□□□□ 0.96
Trim27Q62158 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.05■□□□□ 0.96
Trim27Q62158 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Trim27Q62158 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21.05■□□□□ 0.96
Trim27Q62158 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Trim27Q62158 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim27Q62158 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim27Q62158 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trim27Q62158 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trim27Q62158 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Trim27Q62158 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.04■□□□□ 0.96
Trim27Q62158 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim27Q62158 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim27Q62158 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim27Q62158 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim27Q62158 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim27Q62158 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC21.04■□□□□ 0.96
Trim27Q62158 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.04■□□□□ 0.96
Trim27Q62158 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim27Q62158 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim27Q62158 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim27Q62158 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim27Q62158 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim27Q62158 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim27Q62158 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim27Q62158 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim27Q62158 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.03■□□□□ 0.96
Trim27Q62158 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim27Q62158 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trim27Q62158 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.03■□□□□ 0.96
Trim27Q62158 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim27Q62158 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trim27Q62158 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim27Q62158 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.03■□□□□ 0.96
Trim27Q62158 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim27Q62158 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim27Q62158 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim27Q62158 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trim27Q62158 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.02■□□□□ 0.96
Trim27Q62158 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim27Q62158 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim27Q62158 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim27Q62158 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim27Q62158 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim27Q62158 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim27Q62158 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim27Q62158 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Trim27Q62158 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.01■□□□□ 0.95
Trim27Q62158 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trim27Q62158 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.01■□□□□ 0.95
Trim27Q62158 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Trim27Q62158 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Trim27Q62158 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim27Q62158 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC21.01■□□□□ 0.95
Trim27Q62158 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms