Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ctr9Q62018 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.21■□□□□ 0.83
Ctr9Q62018 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Ctr9Q62018 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ctr9Q62018 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ctr9Q62018 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.2■□□□□ 0.82
Ctr9Q62018 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ctr9Q62018 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ctr9Q62018 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ctr9Q62018 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ctr9Q62018 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ctr9Q62018 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ctr9Q62018 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.2■□□□□ 0.82
Ctr9Q62018 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ctr9Q62018 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ctr9Q62018 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ctr9Q62018 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ctr9Q62018 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ctr9Q62018 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.19■□□□□ 0.82
Ctr9Q62018 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ctr9Q62018 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.19■□□□□ 0.82
Ctr9Q62018 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.19■□□□□ 0.82
Ctr9Q62018 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ctr9Q62018 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ctr9Q62018 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ctr9Q62018 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Ctr9Q62018 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ctr9Q62018 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ctr9Q62018 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ctr9Q62018 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.19■□□□□ 0.82
Ctr9Q62018 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ctr9Q62018 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.19■□□□□ 0.82
Ctr9Q62018 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ctr9Q62018 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.18■□□□□ 0.82
Ctr9Q62018 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ctr9Q62018 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ctr9Q62018 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.18■□□□□ 0.82
Ctr9Q62018 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ctr9Q62018 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ctr9Q62018 Gm22697-201ENSMUST00000175194 63 ntBASIC20.18■□□□□ 0.82
Ctr9Q62018 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ctr9Q62018 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Ctr9Q62018 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ctr9Q62018 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ctr9Q62018 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ctr9Q62018 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ctr9Q62018 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ctr9Q62018 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ctr9Q62018 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ctr9Q62018 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.17■□□□□ 0.82
Ctr9Q62018 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ctr9Q62018 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ctr9Q62018 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ctr9Q62018 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.17■□□□□ 0.82
Ctr9Q62018 Gm10013-201ENSMUST00000106074 672 ntBASIC20.17■□□□□ 0.82
Ctr9Q62018 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Ctr9Q62018 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ctr9Q62018 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ctr9Q62018 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.17■□□□□ 0.82
Ctr9Q62018 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ctr9Q62018 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ctr9Q62018 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ctr9Q62018 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ctr9Q62018 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.17■□□□□ 0.82
Ctr9Q62018 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ctr9Q62018 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.16■□□□□ 0.82
Ctr9Q62018 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ctr9Q62018 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ctr9Q62018 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Ctr9Q62018 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.16■□□□□ 0.82
Ctr9Q62018 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.16■□□□□ 0.82
Ctr9Q62018 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ctr9Q62018 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ctr9Q62018 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ctr9Q62018 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Ctr9Q62018 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.16■□□□□ 0.82
Ctr9Q62018 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ctr9Q62018 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ctr9Q62018 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ctr9Q62018 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ctr9Q62018 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ctr9Q62018 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ctr9Q62018 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ctr9Q62018 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ctr9Q62018 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ctr9Q62018 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.15■□□□□ 0.82
Ctr9Q62018 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ctr9Q62018 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ctr9Q62018 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.15■□□□□ 0.82
Ctr9Q62018 Gm18101-201ENSMUST00000215769 548 ntBASIC20.15■□□□□ 0.82
Ctr9Q62018 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ctr9Q62018 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ctr9Q62018 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ctr9Q62018 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ctr9Q62018 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Ctr9Q62018 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ctr9Q62018 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ctr9Q62018 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ctr9Q62018 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ctr9Q62018 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms