Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rai1Q61818 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.52■□□□□ 0.23
Rai1Q61818 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.52■□□□□ 0.23
Rai1Q61818 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rai1Q61818 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rai1Q61818 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rai1Q61818 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.51■□□□□ 0.23
Rai1Q61818 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.51■□□□□ 0.23
Rai1Q61818 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.51■□□□□ 0.23
Rai1Q61818 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.51■□□□□ 0.23
Rai1Q61818 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rai1Q61818 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.5■□□□□ 0.23
Rai1Q61818 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rai1Q61818 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rai1Q61818 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Rai1Q61818 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Rai1Q61818 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rai1Q61818 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.5■□□□□ 0.23
Rai1Q61818 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rai1Q61818 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rai1Q61818 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.5■□□□□ 0.23
Rai1Q61818 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rai1Q61818 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.5■□□□□ 0.23
Rai1Q61818 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rai1Q61818 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rai1Q61818 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rai1Q61818 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.5■□□□□ 0.23
Rai1Q61818 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rai1Q61818 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rai1Q61818 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rai1Q61818 Gm15372-201ENSMUST00000120729 834 ntBASIC16.5■□□□□ 0.23
Rai1Q61818 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.5■□□□□ 0.23
Rai1Q61818 Gm18733-201ENSMUST00000173950 856 ntBASIC16.5■□□□□ 0.23
Rai1Q61818 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rai1Q61818 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rai1Q61818 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rai1Q61818 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rai1Q61818 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rai1Q61818 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rai1Q61818 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.49■□□□□ 0.23
Rai1Q61818 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rai1Q61818 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Rai1Q61818 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rai1Q61818 Gm5864-201ENSMUST00000202263 970 ntBASIC16.49■□□□□ 0.23
Rai1Q61818 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.49■□□□□ 0.23
Rai1Q61818 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rai1Q61818 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rai1Q61818 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rai1Q61818 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rai1Q61818 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rai1Q61818 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.48■□□□□ 0.23
Rai1Q61818 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rai1Q61818 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rai1Q61818 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.48■□□□□ 0.23
Rai1Q61818 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rai1Q61818 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rai1Q61818 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rai1Q61818 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.48■□□□□ 0.23
Rai1Q61818 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rai1Q61818 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rai1Q61818 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rai1Q61818 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rai1Q61818 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rai1Q61818 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rai1Q61818 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rai1Q61818 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.47■□□□□ 0.23
Rai1Q61818 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rai1Q61818 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rai1Q61818 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rai1Q61818 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.47■□□□□ 0.23
Rai1Q61818 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rai1Q61818 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.47■□□□□ 0.23
Rai1Q61818 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.47■□□□□ 0.23
Rai1Q61818 Gm6443-201ENSMUST00000203599 874 ntBASIC16.47■□□□□ 0.23
Rai1Q61818 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rai1Q61818 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rai1Q61818 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rai1Q61818 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rai1Q61818 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rai1Q61818 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms