Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Foxf1Q61080 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Foxf1Q61080 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Foxf1Q61080 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Foxf1Q61080 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.35□□□□□ -0.11
Foxf1Q61080 Gm22240-201ENSMUST00000175225 82 ntBASIC14.35□□□□□ -0.11
Foxf1Q61080 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Foxf1Q61080 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.35□□□□□ -0.11
Foxf1Q61080 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.34□□□□□ -0.11
Foxf1Q61080 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.34□□□□□ -0.11
Foxf1Q61080 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.34□□□□□ -0.11
Foxf1Q61080 Gm10517-202ENSMUST00000192970 758 ntBASIC14.34□□□□□ -0.11
Foxf1Q61080 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Foxf1Q61080 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Foxf1Q61080 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxf1Q61080 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Foxf1Q61080 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Foxf1Q61080 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Foxf1Q61080 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Foxf1Q61080 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Foxf1Q61080 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Foxf1Q61080 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Foxf1Q61080 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Foxf1Q61080 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Foxf1Q61080 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.33□□□□□ -0.12
Foxf1Q61080 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxf1Q61080 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.32□□□□□ -0.12
Foxf1Q61080 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Foxf1Q61080 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Foxf1Q61080 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.32□□□□□ -0.12
Foxf1Q61080 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.32□□□□□ -0.12
Foxf1Q61080 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.32□□□□□ -0.12
Foxf1Q61080 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxf1Q61080 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Foxf1Q61080 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxf1Q61080 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Foxf1Q61080 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxf1Q61080 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxf1Q61080 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxf1Q61080 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Foxf1Q61080 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Foxf1Q61080 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms