Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a4Q60857 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a4Q60857 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a4Q60857 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a4Q60857 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a4Q60857 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a4Q60857 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a4Q60857 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a4Q60857 Gm6345-202ENSMUST00000180900 204 ntBASIC17.57■□□□□ 0.4
Slc6a4Q60857 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.57■□□□□ 0.4
Slc6a4Q60857 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a4Q60857 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a4Q60857 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a4Q60857 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a4Q60857 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.56■□□□□ 0.4
Slc6a4Q60857 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Gm27389-201ENSMUST00000183622 195 ntBASIC17.56■□□□□ 0.4
Slc6a4Q60857 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.56■□□□□ 0.4
Slc6a4Q60857 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc6a4Q60857 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a4Q60857 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Actl10-202ENSMUST00000226583 1501 ntBASIC17.54■□□□□ 0.4
Slc6a4Q60857 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Gm27000-201ENSMUST00000182943 842 ntBASIC17.54■□□□□ 0.4
Slc6a4Q60857 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slc6a4Q60857 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Gm8969-201ENSMUST00000199694 526 ntBASIC17.53■□□□□ 0.4
Slc6a4Q60857 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Slc6a4Q60857 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms