Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.99■□□□□ 0.31
Col12a1Q60847 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.99■□□□□ 0.31
Col12a1Q60847 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Col12a1Q60847 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.98■□□□□ 0.31
Col12a1Q60847 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col12a1Q60847 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col12a1Q60847 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col12a1Q60847 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col12a1Q60847 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col12a1Q60847 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col12a1Q60847 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col12a1Q60847 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col12a1Q60847 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col12a1Q60847 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.98■□□□□ 0.31
Col12a1Q60847 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.98■□□□□ 0.31
Col12a1Q60847 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col12a1Q60847 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col12a1Q60847 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Col12a1Q60847 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Col12a1Q60847 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.97■□□□□ 0.31
Col12a1Q60847 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Col12a1Q60847 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Col12a1Q60847 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.97■□□□□ 0.31
Col12a1Q60847 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.97■□□□□ 0.31
Col12a1Q60847 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col12a1Q60847 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col12a1Q60847 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col12a1Q60847 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col12a1Q60847 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col12a1Q60847 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.96■□□□□ 0.31
Col12a1Q60847 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.96■□□□□ 0.31
Col12a1Q60847 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col12a1Q60847 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col12a1Q60847 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col12a1Q60847 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col12a1Q60847 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col12a1Q60847 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.96■□□□□ 0.31
Col12a1Q60847 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col12a1Q60847 Gm7230-201ENSMUST00000173026 815 ntBASIC16.96■□□□□ 0.31
Col12a1Q60847 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Col12a1Q60847 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col12a1Q60847 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col12a1Q60847 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.95■□□□□ 0.3
Col12a1Q60847 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col12a1Q60847 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col12a1Q60847 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.94■□□□□ 0.3
Col12a1Q60847 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Col12a1Q60847 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.94■□□□□ 0.3
Col12a1Q60847 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.94■□□□□ 0.3
Col12a1Q60847 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Col12a1Q60847 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.94■□□□□ 0.3
Col12a1Q60847 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.94■□□□□ 0.3
Col12a1Q60847 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col12a1Q60847 Gm15590-201ENSMUST00000078419 552 ntBASIC16.94■□□□□ 0.3
Col12a1Q60847 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col12a1Q60847 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col12a1Q60847 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.93■□□□□ 0.3
Col12a1Q60847 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Col12a1Q60847 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col12a1Q60847 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Col12a1Q60847 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms