Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.4■□□□□ 0.22
Xrcc1Q60596 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Mir7071-201ENSMUST00000184847 69 ntBASIC16.4■□□□□ 0.22
Xrcc1Q60596 Il3ra-202ENSMUST00000223589 738 ntBASIC16.4■□□□□ 0.22
Xrcc1Q60596 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Xrcc1Q60596 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Xrcc1Q60596 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.39■□□□□ 0.21
Xrcc1Q60596 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Gm6433-201ENSMUST00000118634 875 ntBASIC16.39■□□□□ 0.21
Xrcc1Q60596 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.39■□□□□ 0.21
Xrcc1Q60596 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.38■□□□□ 0.21
Xrcc1Q60596 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.38■□□□□ 0.21
Xrcc1Q60596 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.38■□□□□ 0.21
Xrcc1Q60596 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.38■□□□□ 0.21
Xrcc1Q60596 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Xrcc1Q60596 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Xrcc1Q60596 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Xrcc1Q60596 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.37■□□□□ 0.21
Xrcc1Q60596 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.36■□□□□ 0.21
Xrcc1Q60596 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Gm9987-201ENSMUST00000069768 567 ntBASIC16.36■□□□□ 0.21
Xrcc1Q60596 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
Xrcc1Q60596 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms