Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom1Q5SX79 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Shroom1Q5SX79 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom1Q5SX79 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom1Q5SX79 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom1Q5SX79 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Shroom1Q5SX79 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Shroom1Q5SX79 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom1Q5SX79 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.22■□□□□ 0.51
Shroom1Q5SX79 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom1Q5SX79 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom1Q5SX79 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom1Q5SX79 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom1Q5SX79 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Shroom1Q5SX79 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom1Q5SX79 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Gm27389-201ENSMUST00000183622 195 ntBASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Gm8969-201ENSMUST00000199694 526 ntBASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Gm21559-201ENSMUST00000220638 855 ntBASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Gm8587-201ENSMUST00000076538 843 ntBASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.21■□□□□ 0.51
Shroom1Q5SX79 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Gm17661-201ENSMUST00000170317 270 ntBASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom1Q5SX79 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms