Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc85aQ5SP85 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ccdc85aQ5SP85 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc85aQ5SP85 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc85aQ5SP85 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc85aQ5SP85 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.91■□□□□ 0.62
Ccdc85aQ5SP85 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc85aQ5SP85 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.91■□□□□ 0.62
Ccdc85aQ5SP85 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Gm18206-201ENSMUST00000207027 926 ntBASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Gm18195-201ENSMUST00000207604 706 ntBASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc85aQ5SP85 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc85aQ5SP85 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc85aQ5SP85 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.89■□□□□ 0.61
Ccdc85aQ5SP85 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Ccdc85aQ5SP85 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc85aQ5SP85 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc85aQ5SP85 Gm11336-201ENSMUST00000118168 334 ntBASIC18.89■□□□□ 0.61
Ccdc85aQ5SP85 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc85aQ5SP85 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc85aQ5SP85 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.89■□□□□ 0.61
Ccdc85aQ5SP85 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc85aQ5SP85 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ccdc85aQ5SP85 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc85aQ5SP85 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc85aQ5SP85 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85aQ5SP85 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85aQ5SP85 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85aQ5SP85 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc85aQ5SP85 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85aQ5SP85 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85aQ5SP85 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85aQ5SP85 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85aQ5SP85 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Ccdc85aQ5SP85 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85aQ5SP85 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc85aQ5SP85 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85aQ5SP85 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc85aQ5SP85 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms