Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5d-4Q5R1F6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav5d-4Q5R1F6 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.77□□□□□ -0.05
Trav5d-4Q5R1F6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav5d-4Q5R1F6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav5d-4Q5R1F6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav5d-4Q5R1F6 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.77□□□□□ -0.05
Trav5d-4Q5R1F6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav5d-4Q5R1F6 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.77□□□□□ -0.05
Trav5d-4Q5R1F6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Gm10517-202ENSMUST00000192970 758 ntBASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5d-4Q5R1F6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Gm15378-201ENSMUST00000121894 207 ntBASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Gm4974-201ENSMUST00000209974 875 ntBASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav5d-4Q5R1F6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Gm10698-201ENSMUST00000182663 604 ntBASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5d-4Q5R1F6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms