Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-3Q5R1C3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-3Q5R1C3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-3Q5R1C3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav3-3Q5R1C3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav3-3Q5R1C3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav3-3Q5R1C3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-3Q5R1C3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms