Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13aQ5H8C4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps13aQ5H8C4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps13aQ5H8C4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps13aQ5H8C4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.02■□□□□ 0.32
Vps13aQ5H8C4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps13aQ5H8C4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.02■□□□□ 0.32
Vps13aQ5H8C4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.02■□□□□ 0.32
Vps13aQ5H8C4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps13aQ5H8C4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps13aQ5H8C4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.02■□□□□ 0.31
Vps13aQ5H8C4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps13aQ5H8C4 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.02■□□□□ 0.31
Vps13aQ5H8C4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps13aQ5H8C4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps13aQ5H8C4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 Gm37025-201ENSMUST00000195159 829 ntBASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps13aQ5H8C4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps13aQ5H8C4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17■□□□□ 0.31
Vps13aQ5H8C4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps13aQ5H8C4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps13aQ5H8C4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.98■□□□□ 0.31
Vps13aQ5H8C4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps13aQ5H8C4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps13aQ5H8C4 Gm26308-201ENSMUST00000157768 69 ntBASIC16.98■□□□□ 0.31
Vps13aQ5H8C4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.98■□□□□ 0.31
Vps13aQ5H8C4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.98■□□□□ 0.31
Vps13aQ5H8C4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps13aQ5H8C4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms