Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h1Q4VGL6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Gm5587-201ENSMUST00000206270 674 ntBASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h1Q4VGL6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h1Q4VGL6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h1Q4VGL6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h1Q4VGL6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h1Q4VGL6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h1Q4VGL6 Gm25016-201ENSMUST00000158399 131 ntBASIC19.79■□□□□ 0.76
Rc3h1Q4VGL6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h1Q4VGL6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h1Q4VGL6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h1Q4VGL6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h1Q4VGL6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h1Q4VGL6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h1Q4VGL6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.79■□□□□ 0.76
Rc3h1Q4VGL6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h1Q4VGL6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h1Q4VGL6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h1Q4VGL6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h1Q4VGL6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h1Q4VGL6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h1Q4VGL6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h1Q4VGL6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h1Q4VGL6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h1Q4VGL6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h1Q4VGL6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h1Q4VGL6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h1Q4VGL6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Gm11355-201ENSMUST00000121120 306 ntBASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.77■□□□□ 0.76
Rc3h1Q4VGL6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Rc3h1Q4VGL6 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.77■□□□□ 0.75
Rc3h1Q4VGL6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rc3h1Q4VGL6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms