Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Pds5bQ4VA53 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pds5bQ4VA53 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
Pds5bQ4VA53 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pds5bQ4VA53 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pds5bQ4VA53 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pds5bQ4VA53 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC29.96■■■□□ 2.39
Pds5bQ4VA53 Gm25745-201ENSMUST00000174945 133 ntBASIC29.96■■■□□ 2.39
Pds5bQ4VA53 Gm37584-201ENSMUST00000193595 1290 ntBASIC29.96■■■□□ 2.39
Pds5bQ4VA53 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Pds5bQ4VA53 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC29.95■■■□□ 2.38
Pds5bQ4VA53 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.38
Pds5bQ4VA53 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Pds5bQ4VA53 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC29.94■■■□□ 2.38
Pds5bQ4VA53 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Pds5bQ4VA53 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Pds5bQ4VA53 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Pds5bQ4VA53 BC021767-201ENSMUST00000126387 1716 ntBASIC29.94■■■□□ 2.38
Pds5bQ4VA53 Gm6184-201ENSMUST00000120403 1261 ntBASIC29.94■■■□□ 2.38
Pds5bQ4VA53 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Pds5bQ4VA53 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Pds5bQ4VA53 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC29.94■■■□□ 2.38
Pds5bQ4VA53 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Pds5bQ4VA53 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC29.93■■■□□ 2.38
Pds5bQ4VA53 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Pds5bQ4VA53 Gm27321-201ENSMUST00000185021 205 ntBASIC29.93■■■□□ 2.38
Pds5bQ4VA53 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Pds5bQ4VA53 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Pds5bQ4VA53 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Pds5bQ4VA53 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Pds5bQ4VA53 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pds5bQ4VA53 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pds5bQ4VA53 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pds5bQ4VA53 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pds5bQ4VA53 Mir3113-201ENSMUST00000175478 76 ntBASIC29.92■■■□□ 2.38
Pds5bQ4VA53 Gm44872-201ENSMUST00000207864 420 ntBASIC29.92■■■□□ 2.38
Pds5bQ4VA53 AC154757.1-201ENSMUST00000228289 336 ntBASIC29.92■■■□□ 2.38
Pds5bQ4VA53 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pds5bQ4VA53 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pds5bQ4VA53 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pds5bQ4VA53 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pds5bQ4VA53 Gm43213-201ENSMUST00000151866 1790 ntBASIC29.91■■■□□ 2.38
Pds5bQ4VA53 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
Pds5bQ4VA53 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Pds5bQ4VA53 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Pds5bQ4VA53 H2af-ps-201ENSMUST00000119066 295 ntBASIC29.9■■■□□ 2.38
Pds5bQ4VA53 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC29.9■■■□□ 2.38
Pds5bQ4VA53 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC29.9■■■□□ 2.38
Pds5bQ4VA53 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Pds5bQ4VA53 Gm7506-201ENSMUST00000207758 815 ntBASIC29.9■■■□□ 2.38
Pds5bQ4VA53 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
Pds5bQ4VA53 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Pds5bQ4VA53 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Pds5bQ4VA53 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
Pds5bQ4VA53 Mir8117-201ENSMUST00000184773 107 ntBASIC29.89■■■□□ 2.38
Pds5bQ4VA53 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC29.89■■■□□ 2.38
Pds5bQ4VA53 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC29.89■■■□□ 2.38
Pds5bQ4VA53 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Pds5bQ4VA53 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
Pds5bQ4VA53 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Pds5bQ4VA53 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Pds5bQ4VA53 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Pds5bQ4VA53 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pds5bQ4VA53 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pds5bQ4VA53 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pds5bQ4VA53 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Pds5bQ4VA53 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pds5bQ4VA53 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pds5bQ4VA53 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Pds5bQ4VA53 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pds5bQ4VA53 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pds5bQ4VA53 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pds5bQ4VA53 Idnk-204ENSMUST00000226010 1898 ntBASIC29.87■■■□□ 2.37
Pds5bQ4VA53 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Pds5bQ4VA53 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Pds5bQ4VA53 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC29.87■■■□□ 2.37
Pds5bQ4VA53 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Pds5bQ4VA53 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC29.87■■■□□ 2.37
Pds5bQ4VA53 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Pds5bQ4VA53 AC127349.1-201ENSMUST00000224590 266 ntBASIC29.87■■■□□ 2.37
Pds5bQ4VA53 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Pds5bQ4VA53 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
Pds5bQ4VA53 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Gm4913-201ENSMUST00000117075 1290 ntBASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Gm11780-201ENSMUST00000136880 516 ntBASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Pds5bQ4VA53 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Pds5bQ4VA53 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Pds5bQ4VA53 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Pds5bQ4VA53 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Pds5bQ4VA53 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms