Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38aQ4FK66 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Prpf38aQ4FK66 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38aQ4FK66 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.02■□□□□ 0.8
Prpf38aQ4FK66 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38aQ4FK66 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.02■□□□□ 0.8
Prpf38aQ4FK66 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38aQ4FK66 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38aQ4FK66 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38aQ4FK66 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf38aQ4FK66 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prpf38aQ4FK66 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prpf38aQ4FK66 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38aQ4FK66 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Prpf38aQ4FK66 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38aQ4FK66 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Prpf38aQ4FK66 Gm10819-201ENSMUST00000099988 561 ntBASIC20.01■□□□□ 0.79
Prpf38aQ4FK66 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38aQ4FK66 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38aQ4FK66 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38aQ4FK66 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf38aQ4FK66 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf38aQ4FK66 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Prpf38aQ4FK66 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf38aQ4FK66 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Prpf38aQ4FK66 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf38aQ4FK66 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20■□□□□ 0.79
Prpf38aQ4FK66 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf38aQ4FK66 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf38aQ4FK66 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf38aQ4FK66 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf38aQ4FK66 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf38aQ4FK66 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20■□□□□ 0.79
Prpf38aQ4FK66 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Gm27000-201ENSMUST00000182943 842 ntBASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Gm29518-201ENSMUST00000190858 372 ntBASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Gm8969-201ENSMUST00000199694 526 ntBASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf38aQ4FK66 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf38aQ4FK66 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf38aQ4FK66 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms