Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfdn4Q3UWL8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Gm27405-201ENSMUST00000184201 112 ntBASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pfdn4Q3UWL8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfdn4Q3UWL8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfdn4Q3UWL8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfdn4Q3UWL8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms